Papers Discussed in Dehesh Lab Journal Club
5/15/13
Barah et al. Molecular Signatures in Arabidopsis thaliana in Response to Insect
Attack and Bacterial Infection. PLOS ONE, 2013.
Beaudoin et al. Interactions between Abscisic Acid and Ethylene Signaling Cascades. Plant Cell, 2000.
Bian et al. Wolbachia Invades Anopheles stephensi Populations and Induces
Refractoriness to Plasmodium Infection. Science, 2013.
Huang et al. Oleosin of Subcellular Lipid Droplets Evolved in Green Algae. Plant Physiology, 2013.
Reinke et al. Networks of bZIP Protein-Protein Interactions Diversified Over a Billion Years
of Evolution. Science, 2013.
Rewcastle et al. Tyrosine kinase inhibitors. 9. Synthesis and evaluation of fused tricyclic
quinazoline analogues as ATP site inhibitors of the tyrosine kinase activity of
the epidermal growth factor receptor. Journal of Medicinal Chemistry, 1996.
Park et al. The α/β Hydrolase CGI-58 and Peroxisomal Transport Protein PXA1 Coregulate Lipid Homeostasis and Signaling in Arabidopsis. Plant Cell, 2013.
Attack and Bacterial Infection. PLOS ONE, 2013.
Beaudoin et al. Interactions between Abscisic Acid and Ethylene Signaling Cascades. Plant Cell, 2000.
Bian et al. Wolbachia Invades Anopheles stephensi Populations and Induces
Refractoriness to Plasmodium Infection. Science, 2013.
Huang et al. Oleosin of Subcellular Lipid Droplets Evolved in Green Algae. Plant Physiology, 2013.
Reinke et al. Networks of bZIP Protein-Protein Interactions Diversified Over a Billion Years
of Evolution. Science, 2013.
Rewcastle et al. Tyrosine kinase inhibitors. 9. Synthesis and evaluation of fused tricyclic
quinazoline analogues as ATP site inhibitors of the tyrosine kinase activity of
the epidermal growth factor receptor. Journal of Medicinal Chemistry, 1996.
Park et al. The α/β Hydrolase CGI-58 and Peroxisomal Transport Protein PXA1 Coregulate Lipid Homeostasis and Signaling in Arabidopsis. Plant Cell, 2013.
5/7/13
Albrecht et al. Brassinosteroids inhibit pathogen-associated molecular pattern–triggered immune signaling independent of the receptor kinase BAK1. PNAS, 2012.
Gangappa et al. The Arabidopsis B-BOX Protein BBX25 Interacts with HY5, Negatively Regulating BBX22 Expression to Suppress Seedling Photomorphogenesis. Plant Cell, 2013.
Li et al. MicroRNAs Inhibit the Translation of Target mRNAs on the Endoplasmic Reticulum in Arabidopsis. Cell, 2013.
Lopez-Arredondo et al. A novel dominant selectable system for the selection of
transgenic plants under in vitro and greenhouse conditions based on phosphite metabolism. Plant Biotechnology Journal, 2013.
Rengel et al. A Gene-Phenotype Network Based on Genetic Variability for Drought Responses Reveals Key Physiological Processes in Controlled and Natural Environments. PLoS One, 2012.
Richter et al. Posttranslational Influence of NADPH-Dependent Thioredoxin Reductase C on Enzymes in Tetrapyrrole Synthesis. Plant Physiology, 2013.
Gangappa et al. The Arabidopsis B-BOX Protein BBX25 Interacts with HY5, Negatively Regulating BBX22 Expression to Suppress Seedling Photomorphogenesis. Plant Cell, 2013.
Li et al. MicroRNAs Inhibit the Translation of Target mRNAs on the Endoplasmic Reticulum in Arabidopsis. Cell, 2013.
Lopez-Arredondo et al. A novel dominant selectable system for the selection of
transgenic plants under in vitro and greenhouse conditions based on phosphite metabolism. Plant Biotechnology Journal, 2013.
Rengel et al. A Gene-Phenotype Network Based on Genetic Variability for Drought Responses Reveals Key Physiological Processes in Controlled and Natural Environments. PLoS One, 2012.
Richter et al. Posttranslational Influence of NADPH-Dependent Thioredoxin Reductase C on Enzymes in Tetrapyrrole Synthesis. Plant Physiology, 2013.
4/23/13
Church et al. RNA-Guided Human Genome Engineering via Cas9. Science, 2013.
Hayashi et al. Identification of a cis-element that mediates multiple pathways of the endoplasmic reticulum stress response in rice. Plant Journal, 2013.
Jinek et al. A Programmable Dual-RNA−Guided DNA Endonuclease in Adaptive
Bacterial Immunity. Science, 2012.
Liu et al. Activation of the Jasmonic Acid Pathway by Depletion of the Hydroperoxide Lyase OsHPL3 Reveals Crosstalk between the HPL and AOS Branches of the Oxylipin Pathway in Rice. PLoS One, 2012.
Miura et al. SIZ1 deficiency causes reduced stomatal aperture and enhanced drought tolerance via controlling salicylic acid-induced accumulation of reactive oxygen species in Arabidopsis. Plant Journal, 2012.
Ramel et al. Light-Induced Acclimation of the Arabidopsis chlorina1 Mutant to Singlet Oxygen. Plant Cell, 2013.
Rasmussen et al. Transcriptome responses to combinations of stresses in Arabidopsis thaliana. Plant Physiology, 2013.
Xu et al. Identification of a Dual-Targeted Protein Belonging to the Mitochondrial Carrier Family That Is Required for Early Leaf Development in Rice. Plant Physiology, 2013.
Yobi et al. Metabolomic Profiling in Selaginella lepidophylla at Various Hydration States Provides New Insights into the Mechanistic Basis of Desiccation Tolerance. Molecular Plant, 2012.
Hayashi et al. Identification of a cis-element that mediates multiple pathways of the endoplasmic reticulum stress response in rice. Plant Journal, 2013.
Jinek et al. A Programmable Dual-RNA−Guided DNA Endonuclease in Adaptive
Bacterial Immunity. Science, 2012.
Liu et al. Activation of the Jasmonic Acid Pathway by Depletion of the Hydroperoxide Lyase OsHPL3 Reveals Crosstalk between the HPL and AOS Branches of the Oxylipin Pathway in Rice. PLoS One, 2012.
Miura et al. SIZ1 deficiency causes reduced stomatal aperture and enhanced drought tolerance via controlling salicylic acid-induced accumulation of reactive oxygen species in Arabidopsis. Plant Journal, 2012.
Ramel et al. Light-Induced Acclimation of the Arabidopsis chlorina1 Mutant to Singlet Oxygen. Plant Cell, 2013.
Rasmussen et al. Transcriptome responses to combinations of stresses in Arabidopsis thaliana. Plant Physiology, 2013.
Xu et al. Identification of a Dual-Targeted Protein Belonging to the Mitochondrial Carrier Family That Is Required for Early Leaf Development in Rice. Plant Physiology, 2013.
Yobi et al. Metabolomic Profiling in Selaginella lepidophylla at Various Hydration States Provides New Insights into the Mechanistic Basis of Desiccation Tolerance. Molecular Plant, 2012.
4/16/13
Cai et al. Frequency-modulated nuclear localization bursts coordinate gene regulation. Nature, 2008.
Franz et al. Phenotypic Screening with Oleaginous Microalgae Reveals Modulators of Lipid Productivity. ACS Chemical Biology, 2013.
Kong et al. Rapid Severing and Motility of Chloroplast-Actin Filaments Are Required for the Chloroplast Avoidance Response in Arabidopsis. Plant Cell, 2013.
Montillet et al. An Abscisic Acid-Independent Oxylipin Pathway Controls Stomatal Closure and Immune Defense in Arabidopsis. PLoS Biology, 2013.
Singer et al. A Pathogen Type III Effector with a Novel E3 Ubiquitin Ligase Architecture. PLoS Pathogens, 2013.
Franz et al. Phenotypic Screening with Oleaginous Microalgae Reveals Modulators of Lipid Productivity. ACS Chemical Biology, 2013.
Kong et al. Rapid Severing and Motility of Chloroplast-Actin Filaments Are Required for the Chloroplast Avoidance Response in Arabidopsis. Plant Cell, 2013.
Montillet et al. An Abscisic Acid-Independent Oxylipin Pathway Controls Stomatal Closure and Immune Defense in Arabidopsis. PLoS Biology, 2013.
Singer et al. A Pathogen Type III Effector with a Novel E3 Ubiquitin Ligase Architecture. PLoS Pathogens, 2013.
4/10/13
Dragosits et al. A synthetic biology approach to self-regulatory recombinant protein production in Escherichia coli. Journal of Biological Engineering, 2012.
Steiner et al. Editor’s Choice: Evaluating the Potential for Adverse Interactions within Genetically Engineered Breeding Stacks. Plant Physiology, 2013.
Wang et al. Autophagy Contributes to Leaf Starch Degradation. The Plant Cell, 2013.
Wu et al. CRYPTOCHROME 1 Is Implicated in Promoting R Protein-Mediated Plant Resistance to Pseudomonas syringae in Arabidopsis. Molecular Plant, 2010.
Zemach et al. The Arabidopsis Nucleosome Remodeler DDM1 Allows DNA Methyltransferases to Access H1-Containing Heterochromatin. Cell, 2013.
Steiner et al. Editor’s Choice: Evaluating the Potential for Adverse Interactions within Genetically Engineered Breeding Stacks. Plant Physiology, 2013.
Wang et al. Autophagy Contributes to Leaf Starch Degradation. The Plant Cell, 2013.
Wu et al. CRYPTOCHROME 1 Is Implicated in Promoting R Protein-Mediated Plant Resistance to Pseudomonas syringae in Arabidopsis. Molecular Plant, 2010.
Zemach et al. The Arabidopsis Nucleosome Remodeler DDM1 Allows DNA Methyltransferases to Access H1-Containing Heterochromatin. Cell, 2013.
4/2/13
Kaper et al. Fluorescence resonance energy transfer sensors for quantitative monitoring of pentose and disaccharide accumulation in bacteria. Biotechnology for Biofuels, 2008.
Keller et al. Cryptochrome 1 and phytochrome B control shade-avoidance responses in Arabidopsis via partially independent hormonal cascades. Plant Journal, 2011.
Mutka et al. Auxin promotes susceptibility to Pseudomonas syringae via a mechanism independent of suppression of salicylic acid-mediated defenses. Plant Journal, 2013.
Reina et al. Deletion of β-strands 9 and 10 converts VDAC1 voltage dependence in an asymmetrical process. BBA Bioenergetics, 2013.
Savaldi-Goldstein et al. The epidermis both drives and restricts plant shoot growth. Nature, 2007.
Van Landeghem et al. The Potential of Text Mining in Data Integration and Network Biology for Plant Research: A Case Study on Arabidopsis. Plant Cell, 2013.
Keller et al. Cryptochrome 1 and phytochrome B control shade-avoidance responses in Arabidopsis via partially independent hormonal cascades. Plant Journal, 2011.
Mutka et al. Auxin promotes susceptibility to Pseudomonas syringae via a mechanism independent of suppression of salicylic acid-mediated defenses. Plant Journal, 2013.
Reina et al. Deletion of β-strands 9 and 10 converts VDAC1 voltage dependence in an asymmetrical process. BBA Bioenergetics, 2013.
Savaldi-Goldstein et al. The epidermis both drives and restricts plant shoot growth. Nature, 2007.
Van Landeghem et al. The Potential of Text Mining in Data Integration and Network Biology for Plant Research: A Case Study on Arabidopsis. Plant Cell, 2013.
3/26/13
Bermejo et al. Optical sensors for measuring dynamic changes of cytosolic metabolite levels in yeast. Nature Protocols, 2011.
Cerrudo et al. Low Red/Far-Red Ratios Reduce Arabidopsis Resistance to Botrytis cinerea and Jasmonate Responses via a COI1-JAZ10-Dependent, Salicylic Acid-Independent Mechanism. Plant Phsiology, 2012.
Christensen et al. The maize lipoxygenase, ZmLOX10, mediates green leaf volatile, jasmonate and herbivore-induced plant volatile production for defense against insect attack. The Plant Journal, 2013.
Ghelis et al. Protein Tyrosine Kinases and Protein Tyrosine Phosphatases Are Involved in Abscisic Acid-Dependent Processes in Arabidopsis Seeds and Suspension Cells. Plant Physiology, 2008.
Havelund et al. Biochemistry, proteomics, and phosphoproteomics of plant mitochondria from non-photosynthetic cells. Plant Science, 2013.
Hughes et al. Light-dependent, Dark-promoted Interaction between Arabidopsis Cryptochrome 1 and Phytochrome B Proteins. Journal of Biological Chemistry, 2012.
Maeder et al. Robust, synergistic regulation of human gene expression using TALE activators. Nature Methods, 2013.
Montillet et al. An Abscisic Acid-Independent Oxylipin Pathway Controls Stomatal Closure and Immune Defense in Arabidopsis. PLOS Biology, 2013.
Perez-Pinera et al. Synergistic and tunable human gene activation by combinations of synthetic transcription factors. Nature Methods, 2013.
Poraty-Gavra et al. The Arabidopsis Rho of Plants GTPase AtROP6 Functions in Developmental and Pathogen Response Pathways. Plant Physiology, 2013.
Cerrudo et al. Low Red/Far-Red Ratios Reduce Arabidopsis Resistance to Botrytis cinerea and Jasmonate Responses via a COI1-JAZ10-Dependent, Salicylic Acid-Independent Mechanism. Plant Phsiology, 2012.
Christensen et al. The maize lipoxygenase, ZmLOX10, mediates green leaf volatile, jasmonate and herbivore-induced plant volatile production for defense against insect attack. The Plant Journal, 2013.
Ghelis et al. Protein Tyrosine Kinases and Protein Tyrosine Phosphatases Are Involved in Abscisic Acid-Dependent Processes in Arabidopsis Seeds and Suspension Cells. Plant Physiology, 2008.
Havelund et al. Biochemistry, proteomics, and phosphoproteomics of plant mitochondria from non-photosynthetic cells. Plant Science, 2013.
Hughes et al. Light-dependent, Dark-promoted Interaction between Arabidopsis Cryptochrome 1 and Phytochrome B Proteins. Journal of Biological Chemistry, 2012.
Maeder et al. Robust, synergistic regulation of human gene expression using TALE activators. Nature Methods, 2013.
Montillet et al. An Abscisic Acid-Independent Oxylipin Pathway Controls Stomatal Closure and Immune Defense in Arabidopsis. PLOS Biology, 2013.
Perez-Pinera et al. Synergistic and tunable human gene activation by combinations of synthetic transcription factors. Nature Methods, 2013.
Poraty-Gavra et al. The Arabidopsis Rho of Plants GTPase AtROP6 Functions in Developmental and Pathogen Response Pathways. Plant Physiology, 2013.
3/19/13
Geldner et al. Rapid, combinatorial analysis of membrane compartments in intact plants with a multicolor marker set. Plant Journal, 2009.
Hernandez et al. A Cytosolic Acyltransferase Contributes to Triacylglycerol Synthesis in Sucrose-Rescued Arabidopsis Seed Oil Catabolism Mutants. Plant Physiology, 2012.
Jiang et al. RNA-guided editing of bacterial genomes using CRISPR-Cas systems. Nature Biotechnology, 2013.
Liu et al. BIK1 interacts with PEPRs to mediate ethylene-induced immunity. PNAS, 2013.
Mandal et al. Oleic Acid–Dependent Modulation of NITRIC OXIDE ASSOCIATED1 Protein Levels Regulates Nitric Oxide–Mediated Defense Signaling in Arabidopsis. Plant Cell, 2012.
Nordally et al. Circadian Control of Chloroplast Transcription by a Nuclear-Encoded Timing Signal. Science, 2013.
Suzuki et al. Lotus japonicus nodulation is photomorphogenetically controlled by sensing the red/far red (R/FR) ratio through jasmonic acid (JA) signaling. PNAS, 2011.
Hernandez et al. A Cytosolic Acyltransferase Contributes to Triacylglycerol Synthesis in Sucrose-Rescued Arabidopsis Seed Oil Catabolism Mutants. Plant Physiology, 2012.
Jiang et al. RNA-guided editing of bacterial genomes using CRISPR-Cas systems. Nature Biotechnology, 2013.
Liu et al. BIK1 interacts with PEPRs to mediate ethylene-induced immunity. PNAS, 2013.
Mandal et al. Oleic Acid–Dependent Modulation of NITRIC OXIDE ASSOCIATED1 Protein Levels Regulates Nitric Oxide–Mediated Defense Signaling in Arabidopsis. Plant Cell, 2012.
Nordally et al. Circadian Control of Chloroplast Transcription by a Nuclear-Encoded Timing Signal. Science, 2013.
Suzuki et al. Lotus japonicus nodulation is photomorphogenetically controlled by sensing the red/far red (R/FR) ratio through jasmonic acid (JA) signaling. PNAS, 2011.
3/12/13
Buttner et al. Type III Protein Secretion in Plant Pathogenic Bacteria. Plant Physiology, 2009.
Hsieh et al. Chloroplast localization of methylerythritol 4-phosphate pathway enzymes and regulation of mitochondrial genes in ispD and ispE albino mutants in Arabidopsis. Plant Molecular Biology, 2008.
Li et al. Metabolic profiling of the methylerythritol phosphate pathway reveals the source of post-illumination isoprene burst from leaves. Plant, Cell, and Environment, 2013.
Robson et al. Jasmonate and Phytochrome A Signaling in Arabidopsis Wound and Shade Responses Are Integrated through JAZ1 Stability. Plant Cell, 2010.
Sanjaya et al. Altered Lipid Composition and Enhanced Nutritional Value of Arabidopsis Leaves following Introduction of an Algal Diacylglycerol Acyltransferase 2. Plant Cell, 2013.
Van der Does et al. Salicylic Acid Suppresses Jasmonic Acid Signaling Downstream of SCFCOI1-JAZ by Targeting GCC Promoter Motifs via Transcription Factor ORA59. Plant Cell, 2013.
Wahl et al. Regulation of Flowering by Trehalose-6-Phosphate Signaling in Arabidopsis thaliana. Science, 2013.
Hsieh et al. Chloroplast localization of methylerythritol 4-phosphate pathway enzymes and regulation of mitochondrial genes in ispD and ispE albino mutants in Arabidopsis. Plant Molecular Biology, 2008.
Li et al. Metabolic profiling of the methylerythritol phosphate pathway reveals the source of post-illumination isoprene burst from leaves. Plant, Cell, and Environment, 2013.
Robson et al. Jasmonate and Phytochrome A Signaling in Arabidopsis Wound and Shade Responses Are Integrated through JAZ1 Stability. Plant Cell, 2010.
Sanjaya et al. Altered Lipid Composition and Enhanced Nutritional Value of Arabidopsis Leaves following Introduction of an Algal Diacylglycerol Acyltransferase 2. Plant Cell, 2013.
Van der Does et al. Salicylic Acid Suppresses Jasmonic Acid Signaling Downstream of SCFCOI1-JAZ by Targeting GCC Promoter Motifs via Transcription Factor ORA59. Plant Cell, 2013.
Wahl et al. Regulation of Flowering by Trehalose-6-Phosphate Signaling in Arabidopsis thaliana. Science, 2013.
2/26/13
Bemmel et al. A Network Model of the Molecular Organization of Chromatin in Drosophila. Cell, 2013.
Burgos et al. Time Course of Bioluminescent Signal in Orthotopic and Heterotopic Brain
Tumors in Nude Mice. Biotechniques, 2003.
Chaparro et al. Root Exudation of Phytochemicals in Arabidopsis Follows Specific Patterns That Are Developmentally Programmed and Correlate with Soil Microbial Functions. PLoS One, 2013.
Holtan et al. BBX32, an Arabidopsis B-Box Protein, Functions in Light Signaling by Suppressing HY5-Regulated Gene Expression and Interacting with STH2/BBX21. Plant Physiology, 2011.
Kacsoh et al. Fruit Flies Medicate Offspring After Seeing Parasites. Science, 2013.
Krenz et al. The induction of stromule formation by a plant DNA-virus in epidermal leaf tissues suggests a novel intra- and intercellular macromolecular trafficking route. Frontiers in Plant Science, 2012.
Pick et al. PLGG1, a plastidic glycolate glycerate transporter, is required for photorespiration and defines a unique class of metabolite transporters. PNAS, 2013.
Quinlan et al. Mitochondrial Complex II Can Generate Reactive Oxygen Species at High Rates in Both the Forward and Reverse Reactions. Journal of Biological Chemistry, 2012.
Burgos et al. Time Course of Bioluminescent Signal in Orthotopic and Heterotopic Brain
Tumors in Nude Mice. Biotechniques, 2003.
Chaparro et al. Root Exudation of Phytochemicals in Arabidopsis Follows Specific Patterns That Are Developmentally Programmed and Correlate with Soil Microbial Functions. PLoS One, 2013.
Holtan et al. BBX32, an Arabidopsis B-Box Protein, Functions in Light Signaling by Suppressing HY5-Regulated Gene Expression and Interacting with STH2/BBX21. Plant Physiology, 2011.
Kacsoh et al. Fruit Flies Medicate Offspring After Seeing Parasites. Science, 2013.
Krenz et al. The induction of stromule formation by a plant DNA-virus in epidermal leaf tissues suggests a novel intra- and intercellular macromolecular trafficking route. Frontiers in Plant Science, 2012.
Pick et al. PLGG1, a plastidic glycolate glycerate transporter, is required for photorespiration and defines a unique class of metabolite transporters. PNAS, 2013.
Quinlan et al. Mitochondrial Complex II Can Generate Reactive Oxygen Species at High Rates in Both the Forward and Reverse Reactions. Journal of Biological Chemistry, 2012.
2/19/13
Engelhardt et al. Relocalization of Late Blight Resistance Protein R3a to Endosomal Compartments Is Associated with Effector Recognition and Required for the Immune Response. Plant Cell, 2012.
Kaplan, Ian. Trophic Complexity and the Adaptive Value of Damage-Induced Plant Volatiles. PLoS Biology, 2013.
Kim et al. Mutations in an Arabidopsis Mitochondrial Transcription Termination Factor–Related Protein Enhance Thermotolerance in the Absence of the Major Molecular Chaperone HSP101. Plant Cell, 2012.
Lorang et al. Tricking the Guard: Exploiting Plant Defense for Disease Susceptibility. Science, 2012.
Poelman et al. Hyperparasitoids Use Herbivore-Induced Plant Volatiles to Locate Their Parasitoid Host. PLoS Biology, 2013.
Sarmiento et al. The BBX subfamily IV: Additional cogs and sprockets to fine-tune light-dependent development. Plant Signaling and Behavior, 2013.
Terry et al. A model for tetrapyrrole synthesis as the primary mechanism for plastid-to-nucleus signaling during chloroplast biogenesis. Frontiers in Plant Sciences, 2013.
Kaplan, Ian. Trophic Complexity and the Adaptive Value of Damage-Induced Plant Volatiles. PLoS Biology, 2013.
Kim et al. Mutations in an Arabidopsis Mitochondrial Transcription Termination Factor–Related Protein Enhance Thermotolerance in the Absence of the Major Molecular Chaperone HSP101. Plant Cell, 2012.
Lorang et al. Tricking the Guard: Exploiting Plant Defense for Disease Susceptibility. Science, 2012.
Poelman et al. Hyperparasitoids Use Herbivore-Induced Plant Volatiles to Locate Their Parasitoid Host. PLoS Biology, 2013.
Sarmiento et al. The BBX subfamily IV: Additional cogs and sprockets to fine-tune light-dependent development. Plant Signaling and Behavior, 2013.
Terry et al. A model for tetrapyrrole synthesis as the primary mechanism for plastid-to-nucleus signaling during chloroplast biogenesis. Frontiers in Plant Sciences, 2013.
2/12/13
Ball et al. Metabolic Effectors Secreted by Bacterial Pathogens: Essential Facilitators of Plastid Endosymbiosis. Plant Cell, 2013.
Chauvin et al. Four 13-lipoxygenases contribute to rapid jasmonate synthesis in
wounded Arabidopsis thaliana leaves: a role for lipoxygenase 6 in responses to long-distance wound signals. New Phytologist, 2013.
Chen et al. Role of HY5 in abscisic acid response in seeds and seedlings. Plant Signaling and Behavior, 2008.
Rigal et al. The AINTEGUMENTA LIKE1 Homeotic Transcription Factor PtAIL1 Controls the Formation of Adventitious Root Primordia in Poplar. Plant Physiology, 2012.
Roullier et al. Historical collections reveal patterns of diffusion of sweet potato in Oceania obscured by modern plant movements and recombination. PNAS, 2013.
Chauvin et al. Four 13-lipoxygenases contribute to rapid jasmonate synthesis in
wounded Arabidopsis thaliana leaves: a role for lipoxygenase 6 in responses to long-distance wound signals. New Phytologist, 2013.
Chen et al. Role of HY5 in abscisic acid response in seeds and seedlings. Plant Signaling and Behavior, 2008.
Rigal et al. The AINTEGUMENTA LIKE1 Homeotic Transcription Factor PtAIL1 Controls the Formation of Adventitious Root Primordia in Poplar. Plant Physiology, 2012.
Roullier et al. Historical collections reveal patterns of diffusion of sweet potato in Oceania obscured by modern plant movements and recombination. PNAS, 2013.
2/5/13
Ahsan et al. A Versatile Mass Spectrometry-Based Method to Both Identify Kinase Client-Relationships and Characterize Signaling Network Topology. Journal of Proteome Research, 2013.
McBrian et al. Histone Acetylation Regulates Intracellular pH. Molecular Cell, 2012.
Solheim et al. Loss of Lon1 in Arabidopsis Changes the Mitochondrial Proteome Leading to Altered Metabolite Profiles and Growth Retardation without an Accumulation of Oxidative Damage. Plant Physiology, 2012.
Vellosillo et al. Defense Activated by 9-Lipoxygenase-Derived Oxylipins Requires Specific Mitochondrial Proteins. Plant Physiology, 2013.
Wang et al. Metabolic Interactions between the Lands Cycle and the Kennedy Pathway of Glycerolipid Synthesis in Arabidopsis Developing Seeds. Plant Cell, 2012.
Yang et al. Arabidopsis ERF4 is a transcriptional repressor capable of modulating ethylene and abscisic acid responses. Plant Molecular Biology, 2005.
Yu et al. Transcriptional responses of Pseudomonas syringae to growth in epiphytic versus apoplastic leaf site. PNAS, 2013.
Yu et al. Dynamics and biological relevance of DNA demethylation in Arabidopsis antibacterial defense. PNAS, 2012.
McBrian et al. Histone Acetylation Regulates Intracellular pH. Molecular Cell, 2012.
Solheim et al. Loss of Lon1 in Arabidopsis Changes the Mitochondrial Proteome Leading to Altered Metabolite Profiles and Growth Retardation without an Accumulation of Oxidative Damage. Plant Physiology, 2012.
Vellosillo et al. Defense Activated by 9-Lipoxygenase-Derived Oxylipins Requires Specific Mitochondrial Proteins. Plant Physiology, 2013.
Wang et al. Metabolic Interactions between the Lands Cycle and the Kennedy Pathway of Glycerolipid Synthesis in Arabidopsis Developing Seeds. Plant Cell, 2012.
Yang et al. Arabidopsis ERF4 is a transcriptional repressor capable of modulating ethylene and abscisic acid responses. Plant Molecular Biology, 2005.
Yu et al. Transcriptional responses of Pseudomonas syringae to growth in epiphytic versus apoplastic leaf site. PNAS, 2013.
Yu et al. Dynamics and biological relevance of DNA demethylation in Arabidopsis antibacterial defense. PNAS, 2012.
1/22/13
Bartrina et al. Cytokinin Regulates the Activity of Reproductive Meristems, Flower Organ Size, Ovule Formation, and, Thus, Seed Yield in Arabidopsis thaliana. Plant Cell, 2011.
Hemmerlin et al. Post-translational events and modifications regulating plant enzymes involved in isoprenoid precursor biosynthesis. Plant Science, 2013.
Horvath et al. Heat shock response in photosynthetic organisms: Membrane and lipid connections. Progress in Lipids Research, 2012.
Kuo et al. CHAPERONIN 20 mediates iron superoxide dismutase (FeSOD) activity independent of its co-chaperonin role in Arabidopsis chloroplasts. New Phytologist, 2013.
Liang et al. Involvement of COP1 in ethylene- and light-regulated hypocotyl elongation. Planta, 2012.
Navarova et al. Pipecolic Acid, an Endogenous Mediator of Defense Amplification and Priming, Is a Critical Regulator of Inducible Plant Immunity. Plant Cell, 2012.
Osakabe et al. Sensing the environment: key roles of membrane-localized kinases in plant perception and response to abiotic stress. Journal of Experimental Botany, 2013.
Pennisi. The Tale of the TALEs. Science, 2012.
Shyh-Chang et al. Influence of Threonine Metabolism on S-Adenosylmethionine and Histone Methylation. Science, 2012.
Hemmerlin et al. Post-translational events and modifications regulating plant enzymes involved in isoprenoid precursor biosynthesis. Plant Science, 2013.
Horvath et al. Heat shock response in photosynthetic organisms: Membrane and lipid connections. Progress in Lipids Research, 2012.
Kuo et al. CHAPERONIN 20 mediates iron superoxide dismutase (FeSOD) activity independent of its co-chaperonin role in Arabidopsis chloroplasts. New Phytologist, 2013.
Liang et al. Involvement of COP1 in ethylene- and light-regulated hypocotyl elongation. Planta, 2012.
Navarova et al. Pipecolic Acid, an Endogenous Mediator of Defense Amplification and Priming, Is a Critical Regulator of Inducible Plant Immunity. Plant Cell, 2012.
Osakabe et al. Sensing the environment: key roles of membrane-localized kinases in plant perception and response to abiotic stress. Journal of Experimental Botany, 2013.
Pennisi. The Tale of the TALEs. Science, 2012.
Shyh-Chang et al. Influence of Threonine Metabolism on S-Adenosylmethionine and Histone Methylation. Science, 2012.
1/15/13
Anderson et al. Antagonistic Interaction between Abscisic Acid and Jasmonate-Ethylene Signaling Pathways Modulates Defense Gene Expression and Disease Resistance in Arabidopsis. Plant Cell, 2004.
Chen et al. Integration of light and abscisic acid signaling during seed germination and early seedling development. PNAS, 2008.
Geng et al. The Coronatine Toxin of Pseudomonas syringae Is a Multifunctional Suppressor of Arabidopsis Defense. Plant Cell, 2012.
Goodspeed et al. Circadian control of jasmonates and salicylates: The clock role in plant defense. Plant Signaling & Behavior, 2013.
Kim et al. AtABCA9 transporter supplies fatty acids for lipid synthesis to the endoplasmic reticulum. PNAS, 2013.
Kong et al. The MEKK1-MKK1/MKK2-MPK4 Kinase Cascade Negatively Regulates Immunity Mediated by a Mitogen-Activated Protein Kinase Kinase Kinase in Arabidopsis. Plant Cell, 2012.
Zhang et al. Disruption of PAMP-Induced MAP Kinase Cascade by a Pseudomonas syringae Effector Activates Plant Immunity Mediated by the NB-LRR Protein SUMM2. Cell Host & Microbe, 2012.
Zhang et al. Interaction of barley powdery mildew effector candidate CSEP0055 with the defence protein PR17c. Molecular Plant Pathology, 2012.
Chen et al. Integration of light and abscisic acid signaling during seed germination and early seedling development. PNAS, 2008.
Geng et al. The Coronatine Toxin of Pseudomonas syringae Is a Multifunctional Suppressor of Arabidopsis Defense. Plant Cell, 2012.
Goodspeed et al. Circadian control of jasmonates and salicylates: The clock role in plant defense. Plant Signaling & Behavior, 2013.
Kim et al. AtABCA9 transporter supplies fatty acids for lipid synthesis to the endoplasmic reticulum. PNAS, 2013.
Kong et al. The MEKK1-MKK1/MKK2-MPK4 Kinase Cascade Negatively Regulates Immunity Mediated by a Mitogen-Activated Protein Kinase Kinase Kinase in Arabidopsis. Plant Cell, 2012.
Zhang et al. Disruption of PAMP-Induced MAP Kinase Cascade by a Pseudomonas syringae Effector Activates Plant Immunity Mediated by the NB-LRR Protein SUMM2. Cell Host & Microbe, 2012.
Zhang et al. Interaction of barley powdery mildew effector candidate CSEP0055 with the defence protein PR17c. Molecular Plant Pathology, 2012.
1/8/13
Crocco et al. AtBBX21 and COP1 genetically interact in the regulation of shade avoidance. Plant Journal, 2010.
Helms et al. Exposure of Solidago altissima plants to volatile emissions of an insect antagonist (Eurosta solidaginis) deters subsequent herbivory. PNAS, 2013.
Li et al. The ethylene response factor AtERF11 that is transcriptionally modulated by the bZIP transcription factor HY5 is a crucial repressor for ethylene biosynthesis in Arabidopsis. Plant Journal, 2011.
Murray et al. Systems analysis of shoot apical meristem growth and development: integrating hormonal and mechanical signaling. Plant Cell, 2012.
Secchi et al. Transcriptome Response to Embolism Formation in Stems of Populus trichocarpa Provides Insight into Signaling and the Biology of Refilling. Plant Phys, 2011.
Van Bentem et al. Protein tyrosine phosphorylation in plants: more abundant than expected? Trends in Plant Science, 2009.
Woodson et al. Sigma factor-mediated plastid retrograde signals control nuclear gene expression. Plant Journal, 2013.
Helms et al. Exposure of Solidago altissima plants to volatile emissions of an insect antagonist (Eurosta solidaginis) deters subsequent herbivory. PNAS, 2013.
Li et al. The ethylene response factor AtERF11 that is transcriptionally modulated by the bZIP transcription factor HY5 is a crucial repressor for ethylene biosynthesis in Arabidopsis. Plant Journal, 2011.
Murray et al. Systems analysis of shoot apical meristem growth and development: integrating hormonal and mechanical signaling. Plant Cell, 2012.
Secchi et al. Transcriptome Response to Embolism Formation in Stems of Populus trichocarpa Provides Insight into Signaling and the Biology of Refilling. Plant Phys, 2011.
Van Bentem et al. Protein tyrosine phosphorylation in plants: more abundant than expected? Trends in Plant Science, 2009.
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