Resources for Cell And Molecular Biologists

Places to search for Arabidopsis gene inserts and order seeds

• Syngenta SAIL project
  

Databases

• TAIR = The Arabidopsis Information Resource
• NCBI = Enrtrez, Blast, etc.
• MIPS
  
• ISREC Bioinformatics
  
• Saccharomyces Genome Database
  
• PropSearch, a property-based comparison routine
  
• A link to many databases, especially HUGO
• COSMOSS
• NIBB PHYSCObase
• JGI

Targeting prediction software

• ChloroP
• SignalP
• TargetP
• PSORT
• BaCelLo
• Predator
• TatFIND
• MITOPRED

Software for specific applications

• ExPASy site for basic protein analysis
• Center for Biological Sequence Analysis (von Heijne)
• Oligo calculator
  
• EST alignments
  
• COILS, to predict coiled-coil domains
  
• BOXSHADE
  
• ISREC software for protein analysis
  
• neural network predictions of gene splice sites in Arabidopsis thaliana DNA
  
• Promoter Prediction by Neural Network
  
• ClustalW Multiple Sequence Alignment
  
• Link to software available from TIGR
• Hydrophobicity plot and other similar stuff

Techniques

• Elsevier Technical Tips Online

Vendors and Suppliers

• BioSupplyNet
  
• SciQuest; login = theg
• Vendor pages

Other useful or interesting sites